高级检索

    一种基于CRISPR技术的肺癌细胞基因标记方法

    A CRISPR-based technical strategy for gene tagging in lung cancer cells

    • 摘要: 目的 建立基于成簇规律间隔短回文重复序列(CRISPR)技术的功能基因标签标记方法。方法 通过分子无缝克隆技术构建Cas9核酸酶表达载体、DCAF12基因特异的sgRNA表达载体以及双剪切型供体DNA载体;将上述质粒共同转染肺癌细胞A549,用嘌呤霉素抗性基因作为选择标记进行筛选。联合RNA干扰和Western blot技术鉴定DCAF12基因是否被HA标签正确标记;后续用Cre重组酶切除胞内选择标记,并通过PCR和Western blot技术确认;最后通过细胞增殖试验和克隆存活试验鉴定DCAF12基因标记对重组细胞生长的影响;用HA抗体进行免疫共沉淀试验,检测HA-DCAF12蛋白是否与胞内cullin-4-RING泛素连接酶(CRL4)复合体相关蛋白结合。结果 RNA干扰和Western blot技术证实肺癌细胞DCAF12基因能够被HA标签表位正确标记;胞内选择标记被剔除后,能够避免对内源DCAF12基因表达的影响。细胞增殖与克隆存活试验证实DCAF12基因被HA标签标记后没有影响细胞生长;免疫共沉淀试验证实HA-DCAF12蛋白能够与CRL4复合体中的cullin-4A及DDB1蛋白相结合,提示DCAF12基因经HA标签标记后并未影响其自身生物学功能。结论 本研究以肺癌细胞DCAF12基因为例,成功建立一种通过表位标签简便、快捷标记功能基因的技术方法。

       

      Abstract: Objective To establish a clustered regularly-interspaced short palindromic repeats (CRISPR)-based technical strategy for gene tagging in lung cancer cells. Methods Cas9, DCAF12small guide RNA (sgRNA) and double cut donor DNA plasmids were constructed by a PCR-based seamless cloning method. These plasmids were co-transfected into A549 cells and the stable expression clones were selected with puromycin. The puromycin-resistant cells were transfected with sall interfering RNA (siRNA) against DCAF12 for 72 h. The expression and knockdown efficiency of DCAF12 were then analyzed by Western blot with an anti-HA antibody to confirm the correct tagging. The floxed puromycin gene in the validated cells was removed by adenovirus expressing Cre recombinase which was further confirmed by PCR and Western blot. Cancer cell growth was determined by proliferation and clonogenic survival assays. Co-immunoprecipitation by anti-HA antibody was used to test whether DCAF12 protein is capable of binding to cullin-4-RING E3 ligase (CRL4) complex associated proteins. Results PCR and Western blot confirmed that the HA tag was successfully in frame fused to the N-terminal of DCAF12 protein and excision of puromycin resistant marker significantly increased HA-DCAF12 expression in cells. Cancer cell growth seemed not to be influenced by HA-DCAF12 expression. Functionally, HA-DCAF12 could efficiently pull down cullin-4A and DDB1, the key components of CRL4 complexes, indicating that the HA tagging did not affect DCAF12 biological functions. Conclusions By tagging DCAF12 gene in lung cancer cells, we successfully establish a simple and rapid method for gene tagging.

       

    /

    返回文章
    返回