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    基于生物信息学探讨血府逐瘀汤治疗子宫肌瘤的作用机制

    Mechanism of Xuefu Zhuyu Decoction in the treatment of uterine fibroids based on bioinformatics

    • 摘要: 目的 基于生物信息学方法探讨血府逐瘀汤治疗子宫肌瘤的潜在作用机制。方法 利用TCMSP、TCMID、PubChem等数据库检索并筛选血府逐瘀汤的活性成分和潜在靶点。利用GEO数据库检索和筛选子宫肌瘤的相关靶点。借助 STRING平台构建血府逐瘀汤治疗子宫肌瘤靶点的蛋白质相互关系(PPI)网络。使用Cytoscape软件筛选血府逐瘀汤治疗子宫肌瘤的关键靶点。使用DAVID数据库对关键基因进行GO功能富集分析和KEGG信号通路富集。结果 经检索,获得血府逐瘀汤活性成分112个,预测活性成分的潜在靶点共7 434个,获得子宫肌瘤显著差异基因1 518个,通过韦恩图分析获得血府逐瘀汤活性成分靶点与子宫肌瘤差异基因的共同靶点118个。在PPI网络中筛选获得30个关键基因。对关键基因进行富集,GO分析主要涉及MAPK级联的正向调节、ERK1和ERK2级联的正向调节、细胞迁移的正向调节等生物过程;KEGG通路分析主要涉及PI3K-Akt信号通路、NOD样受体信号通路、肿瘤坏死因子(TNF)信号通路等。结论 血府逐瘀汤可能通过"活性成分—关键靶点—通路"作用减少炎症反应、降低氧化应激、促进血管新生,从而发挥治疗子宫肌瘤的作用。

       

      Abstract: Objective To explore the potential mechanism of action of Xuefu Zhuyu Decoction in the treatment of uterine fibroids based on bioinformatics methods.Methods The active ingredients and potential targets of Xuefu Zhuyu Decoction were searched using TCMSP, TCMID, PubChem and other databases. The GEO database was used to screen the differential genes about uterine fibroids. The overlapping targets of Xuefu Zhuyu Decoction for the treatment of uterine fibroid were obtained to construct a protein interaction (PPI) network through STRING database. The key targets involved were screened with Cytoscape software. The GeneOntology functional enrichment analysis and KEGG signaling pathway enrichment were performed with DAID database.Results There were 112 active ingredients in Xuefu Zhuyu Decoction, with 7 434 potential targets, in addition to 1 518 differentially expressed genes associated with uterine fibroid. The Venn diagram illustrated 118 overlapping targets of Xuefu Zhuyu Decoction for the treatment of uterine fibroid, while 30 key targets were screened through the PPI network. Furthermore, GO enrichment analysis mainly involved the positive regulation of MAPK cascade, ERK1 and ERK2 cascade, and cell migration, while KEGG enrichment analysis showed that it mainly involved PI3K-Akt signaling pathway, NOD-like receptor signaling pathway, and tumor necrosis factor (TNF) signaling pathway.Conclusions Xuefu Zhuyu Decoction may reduce inflammation, decrease oxidative stress, and promote neovascularization through the "active ingredient-key target-pathway" effect, which may be effective in the treatment of uterine fibroids.

       

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